Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.98■□□□□ 0.79
RTN3O95197 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN3O95197 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN3O95197 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RTN3O95197 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.97■□□□□ 0.79
RTN3O95197 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.97■□□□□ 0.79
RTN3O95197 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN3O95197 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.97■□□□□ 0.79
RTN3O95197 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.97■□□□□ 0.79
RTN3O95197 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
RTN3O95197 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.97■□□□□ 0.79
RTN3O95197 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RTN3O95197 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.96■□□□□ 0.79
RTN3O95197 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.96■□□□□ 0.79
RTN3O95197 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RTN3O95197 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTN3O95197 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTN3O95197 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
RTN3O95197 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RTN3O95197 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
RTN3O95197 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.96■□□□□ 0.79
RTN3O95197 AC010331.1-201ENST00000611423 582 ntBASIC19.96■□□□□ 0.79
RTN3O95197 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTN3O95197 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN3O95197 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTN3O95197 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTN3O95197 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.95■□□□□ 0.78
RTN3O95197 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RTN3O95197 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTN3O95197 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.95■□□□□ 0.78
RTN3O95197 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RTN3O95197 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTN3O95197 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTN3O95197 BX664615.1-201ENST00000443558 458 ntBASIC19.95■□□□□ 0.78
RTN3O95197 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.95■□□□□ 0.78
RTN3O95197 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.95■□□□□ 0.78
RTN3O95197 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.95■□□□□ 0.78
RTN3O95197 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTN3O95197 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN3O95197 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RTN3O95197 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.95■□□□□ 0.78
RTN3O95197 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN3O95197 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RTN3O95197 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.94■□□□□ 0.78
RTN3O95197 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN3O95197 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.94■□□□□ 0.78
RTN3O95197 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms