Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.02■□□□□ 0.32
UBL3O95164 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UBL3O95164 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL3O95164 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBL3O95164 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.02■□□□□ 0.32
UBL3O95164 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.02■□□□□ 0.32
UBL3O95164 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL3O95164 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL3O95164 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.02■□□□□ 0.32
UBL3O95164 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.02■□□□□ 0.32
UBL3O95164 AL353807.1-201ENST00000427475 662 ntBASIC17.02■□□□□ 0.32
UBL3O95164 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UBL3O95164 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL3O95164 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
UBL3O95164 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBL3O95164 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.02■□□□□ 0.31
UBL3O95164 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.02■□□□□ 0.31
UBL3O95164 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBL3O95164 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBL3O95164 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.02■□□□□ 0.31
UBL3O95164 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBL3O95164 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
UBL3O95164 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.01■□□□□ 0.31
UBL3O95164 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.01■□□□□ 0.31
UBL3O95164 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.01■□□□□ 0.31
UBL3O95164 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.01■□□□□ 0.31
UBL3O95164 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.01■□□□□ 0.31
UBL3O95164 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.01■□□□□ 0.31
UBL3O95164 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.01■□□□□ 0.31
UBL3O95164 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.01■□□□□ 0.31
UBL3O95164 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBL3O95164 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBL3O95164 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBL3O95164 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UBL3O95164 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UBL3O95164 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17■□□□□ 0.31
UBL3O95164 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
UBL3O95164 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17■□□□□ 0.31
UBL3O95164 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17■□□□□ 0.31
UBL3O95164 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17■□□□□ 0.31
UBL3O95164 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17■□□□□ 0.31
UBL3O95164 RARRES2P10-201ENST00000564312 460 ntBASIC17■□□□□ 0.31
UBL3O95164 AL135905.2-201ENST00000584934 1404 ntBASIC17■□□□□ 0.31
UBL3O95164 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17■□□□□ 0.31
UBL3O95164 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17■□□□□ 0.31
UBL3O95164 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBL3O95164 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
UBL3O95164 AC020916.1-201ENST00000587762 1774 ntBASIC17■□□□□ 0.31
UBL3O95164 HTR7P1-201ENST00000538670 1336 ntBASIC16.99■□□□□ 0.31
UBL3O95164 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBL3O95164 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
UBL3O95164 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.99■□□□□ 0.31
UBL3O95164 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.99■□□□□ 0.31
UBL3O95164 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.99■□□□□ 0.31
UBL3O95164 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBL3O95164 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms