Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AL512353.2-201ENST00000448759 1962 ntBASIC19.19■□□□□ 0.66
USP1O94782 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.19■□□□□ 0.66
USP1O94782 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.19■□□□□ 0.66
USP1O94782 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.19■□□□□ 0.66
USP1O94782 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.19■□□□□ 0.66
USP1O94782 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
USP1O94782 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.18■□□□□ 0.66
USP1O94782 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.18■□□□□ 0.66
USP1O94782 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 TSPY23P-201ENST00000440136 739 ntBASIC19.18■□□□□ 0.66
USP1O94782 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.18■□□□□ 0.66
USP1O94782 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.18■□□□□ 0.66
USP1O94782 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP1O94782 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.18■□□□□ 0.66
USP1O94782 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.18■□□□□ 0.66
USP1O94782 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP1O94782 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
USP1O94782 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.17■□□□□ 0.66
USP1O94782 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
USP1O94782 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.17■□□□□ 0.66
USP1O94782 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP1O94782 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.17■□□□□ 0.66
USP1O94782 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 AC239809.2-201ENST00000415381 517 ntBASIC19.17■□□□□ 0.66
USP1O94782 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.17■□□□□ 0.66
USP1O94782 KRT16P5-201ENST00000455284 522 ntBASIC19.17■□□□□ 0.66
USP1O94782 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.17■□□□□ 0.66
USP1O94782 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.17■□□□□ 0.66
USP1O94782 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
USP1O94782 AL023875.1-201ENST00000640777 796 ntBASIC19.17■□□□□ 0.66
USP1O94782 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.17■□□□□ 0.66
USP1O94782 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
USP1O94782 LTB4R2-202ENST00000528054 3092 ntBASIC19.17■□□□□ 0.66
USP1O94782 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
USP1O94782 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.17■□□□□ 0.66
USP1O94782 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP1O94782 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
USP1O94782 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.16■□□□□ 0.66
USP1O94782 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.16■□□□□ 0.66
USP1O94782 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.16■□□□□ 0.66
USP1O94782 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.16■□□□□ 0.66
USP1O94782 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.16■□□□□ 0.66
USP1O94782 AC083906.6-201ENST00000641366 219 ntBASIC19.16■□□□□ 0.66
USP1O94782 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
USP1O94782 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP1O94782 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.16■□□□□ 0.66
USP1O94782 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
USP1O94782 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP1O94782 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
USP1O94782 KRT8P41-201ENST00000533985 1514 ntBASIC19.15■□□□□ 0.66
USP1O94782 FZD10-202ENST00000539839 3282 ntBASIC19.15■□□□□ 0.66
USP1O94782 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
USP1O94782 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP1O94782 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP1O94782 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms