Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
BEST1O76090 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.92■□□□□ 0.78
BEST1O76090 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BEST1O76090 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.91■□□□□ 0.78
BEST1O76090 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
BEST1O76090 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.91■□□□□ 0.78
BEST1O76090 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
BEST1O76090 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
BEST1O76090 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 AL023284.2-201ENST00000405850 579 ntBASIC19.91■□□□□ 0.78
BEST1O76090 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.91■□□□□ 0.78
BEST1O76090 AC104076.2-201ENST00000448912 469 ntBASIC19.91■□□□□ 0.78
BEST1O76090 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.91■□□□□ 0.78
BEST1O76090 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.91■□□□□ 0.78
BEST1O76090 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.91■□□□□ 0.78
BEST1O76090 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.91■□□□□ 0.78
BEST1O76090 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BEST1O76090 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BEST1O76090 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 AL512353.2-201ENST00000448759 1962 ntBASIC19.9■□□□□ 0.78
BEST1O76090 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
BEST1O76090 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.9■□□□□ 0.78
BEST1O76090 ATP5G1P1-201ENST00000448724 379 ntBASIC19.9■□□□□ 0.78
BEST1O76090 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.9■□□□□ 0.78
BEST1O76090 AC006011.2-201ENST00000621313 1158 ntBASIC19.9■□□□□ 0.78
BEST1O76090 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.9■□□□□ 0.78
BEST1O76090 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
BEST1O76090 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.9■□□□□ 0.78
BEST1O76090 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.9■□□□□ 0.78
BEST1O76090 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BEST1O76090 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BEST1O76090 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.9■□□□□ 0.78
BEST1O76090 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.9■□□□□ 0.78
BEST1O76090 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.9■□□□□ 0.78
BEST1O76090 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.9■□□□□ 0.78
BEST1O76090 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
BEST1O76090 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
BEST1O76090 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
BEST1O76090 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
BEST1O76090 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
BEST1O76090 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.89■□□□□ 0.77
BEST1O76090 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
BEST1O76090 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
BEST1O76090 AC141257.4-201ENST00000634557 245 ntBASIC19.89■□□□□ 0.77
BEST1O76090 AC136944.6-201ENST00000634818 245 ntBASIC19.89■□□□□ 0.77
BEST1O76090 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
BEST1O76090 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BEST1O76090 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.88■□□□□ 0.77
BEST1O76090 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.88■□□□□ 0.77
BEST1O76090 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.88■□□□□ 0.77
BEST1O76090 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.88■□□□□ 0.77
BEST1O76090 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BEST1O76090 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms