Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR4758-201ENST00000577688 71 ntBASIC18.69■□□□□ 0.58
TRIM13O60858 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TRIM13O60858 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM13O60858 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM13O60858 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM13O60858 MYC-209ENST00000641252 345 ntBASIC18.69■□□□□ 0.58
TRIM13O60858 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM13O60858 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM13O60858 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM13O60858 AL133373.2-201ENST00000623187 2828 ntBASIC18.69■□□□□ 0.58
TRIM13O60858 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM13O60858 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM13O60858 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRIM13O60858 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM13O60858 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM13O60858 SLC29A4P1-201ENST00000398760 971 ntBASIC18.68■□□□□ 0.58
TRIM13O60858 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
TRIM13O60858 AC006970.2-201ENST00000450065 779 ntBASIC18.68■□□□□ 0.58
TRIM13O60858 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM13O60858 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM13O60858 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM13O60858 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM13O60858 AL137784.2-201ENST00000607332 1000 ntBASIC18.68■□□□□ 0.58
TRIM13O60858 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM13O60858 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM13O60858 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM13O60858 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM13O60858 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM13O60858 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM13O60858 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM13O60858 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM13O60858 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM13O60858 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM13O60858 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM13O60858 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
TRIM13O60858 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM13O60858 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRIM13O60858 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM13O60858 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.67■□□□□ 0.58
TRIM13O60858 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM13O60858 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM13O60858 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM13O60858 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM13O60858 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM13O60858 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.66■□□□□ 0.58
TRIM13O60858 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM13O60858 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 GUSBP6-202ENST00000438529 1198 ntBASIC18.66■□□□□ 0.58
TRIM13O60858 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM13O60858 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM13O60858 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM13O60858 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM13O60858 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM13O60858 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM13O60858 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM13O60858 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM13O60858 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM13O60858 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM13O60858 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM13O60858 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM13O60858 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms