Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH7O60245 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH7O60245 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH7O60245 AC093525.10-201ENST00000625130 1569 ntBASIC18.13■□□□□ 0.49
PCDH7O60245 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH7O60245 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH7O60245 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDH7O60245 NEFHP1-201ENST00000412845 2629 ntBASIC18.12■□□□□ 0.49
PCDH7O60245 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDH7O60245 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PCDH7O60245 AL353807.1-201ENST00000427475 662 ntBASIC18.12■□□□□ 0.49
PCDH7O60245 RPS2P4-201ENST00000476944 856 ntBASIC18.12■□□□□ 0.49
PCDH7O60245 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDH7O60245 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDH7O60245 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH7O60245 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH7O60245 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH7O60245 AL031598.1-201ENST00000561511 1773 ntBASIC18.12■□□□□ 0.49
PCDH7O60245 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH7O60245 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDH7O60245 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDH7O60245 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDH7O60245 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH7O60245 KSR1P1-201ENST00000446298 240 ntBASIC18.11■□□□□ 0.49
PCDH7O60245 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH7O60245 FAM197Y4-202ENST00000622692 608 ntBASIC18.11■□□□□ 0.49
PCDH7O60245 AC083906.6-201ENST00000641366 219 ntBASIC18.11■□□□□ 0.49
PCDH7O60245 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH7O60245 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH7O60245 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH7O60245 AL512353.2-201ENST00000448759 1962 ntBASIC18.11■□□□□ 0.49
PCDH7O60245 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PCDH7O60245 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH7O60245 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH7O60245 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH7O60245 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH7O60245 Z98044.1-201ENST00000632503 1764 ntBASIC18.1■□□□□ 0.49
PCDH7O60245 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH7O60245 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 TSPY20P-201ENST00000450910 630 ntBASIC18.1■□□□□ 0.49
PCDH7O60245 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDH7O60245 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDH7O60245 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 ITM2C-210ENST00000620962 501 ntBASIC18.1■□□□□ 0.49
PCDH7O60245 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH7O60245 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDH7O60245 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH7O60245 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms