Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM49D1C9J1S8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 AC060766.5-201ENST00000590539 871 ntBASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM49D1C9J1S8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRIM49D1C9J1S8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 AC090340.1-201ENST00000620778 4980 ntBASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 MIR4758-201ENST00000577688 71 ntBASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRIM49D1C9J1S8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19■□□□□ 0.63
TRIM49D1C9J1S8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19■□□□□ 0.63
TRIM49D1C9J1S8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM49D1C9J1S8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms