Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.71
SBNO1A3KN83 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
SBNO1A3KN83 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.7■■□□□ 1.71
SBNO1A3KN83 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SBNO1A3KN83 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SBNO1A3KN83 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SBNO1A3KN83 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SBNO1A3KN83 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SBNO1A3KN83 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SBNO1A3KN83 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 AC104819.1-201ENST00000504587 486 ntBASIC25.69■■□□□ 1.7
SBNO1A3KN83 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 UBC-206ENST00000538617 1303 ntTSL 5 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.69■■□□□ 1.7
SBNO1A3KN83 AL390719.2-201ENST00000606993 987 ntBASIC25.69■■□□□ 1.7
SBNO1A3KN83 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SBNO1A3KN83 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 HLA-A-201ENST00000376802 1334 ntBASIC25.68■■□□□ 1.7
SBNO1A3KN83 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 GOLGA6L5P-202ENST00000515341 1828 ntBASIC25.68■■□□□ 1.7
SBNO1A3KN83 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SBNO1A3KN83 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC25.68■■□□□ 1.7
SBNO1A3KN83 AL353801.3-201ENST00000609898 542 ntBASIC25.68■■□□□ 1.7
SBNO1A3KN83 Z83836.1-201ENST00000624605 1642 ntBASIC25.68■■□□□ 1.7
SBNO1A3KN83 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 AKR1C7P-201ENST00000305623 895 ntBASIC25.67■■□□□ 1.7
SBNO1A3KN83 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 AC090616.6-201ENST00000582640 721 ntBASIC25.67■■□□□ 1.7
SBNO1A3KN83 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 BX640515.1-201ENST00000617215 977 ntBASIC25.67■■□□□ 1.7
SBNO1A3KN83 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SBNO1A3KN83 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SBNO1A3KN83 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SBNO1A3KN83 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms