Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 DUX4L16-201ENST00000555130 1264 ntBASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 AC010980.2-201ENST00000587099 1412 ntBASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 KRT17P1-201ENST00000399211 1546 ntBASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV18A0A075B6X5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 AC137761.2-201ENST00000561729 223 ntBASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 AC145350.3-201ENST00000569033 163 ntBASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV18A0A075B6X5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 AC083906.6-201ENST00000641366 219 ntBASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV18A0A075B6X5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV18A0A075B6X5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms