Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV25-1A0A075B6N4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV25-1A0A075B6N4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 AL390719.1-204ENST00000412397 1219 ntBASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 AC093787.1-201ENST00000450396 207 ntBASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 KRT17P1-201ENST00000399211 1546 ntBASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV25-1A0A075B6N4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV25-1A0A075B6N4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms