Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC245060.6-201ENST00000624350 8420 ntBASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
KRTAP4-11Q9BYQ6 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL359195.2-201ENST00000623657 4412 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU1-19P-201ENST00000363306 165 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RN7SKP107-201ENST00000364157 290 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU6-1047P-201ENST00000364418 107 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNA5SP140-201ENST00000364524 92 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR588-201ENST00000384900 83 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR563-201ENST00000385080 79 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR143-201ENST00000385300 106 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNA5SP91-201ENST00000390902 119 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNA5SP109-201ENST00000391010 116 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SNORA3.1-201ENST00000408166 111 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SRSF1P1-201ENST00000424058 520 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 KRTAP2-5P-201ENST00000446109 396 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 HLA-DPA3-207ENST00000454398 229 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC098847.1-201ENST00000473094 348 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC104619.4-201ENST00000510773 249 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PHBP14-201ENST00000512887 367 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RNU6-667P-201ENST00000517186 102 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC044860.2-201ENST00000561005 179 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR4716-201ENST00000579628 84 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 SNORD95-201ENST00000579879 68 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 RN7SL404P-201ENST00000582421 281 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL356218.2-201ENST00000605264 187 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 MIR6810-201ENST00000622701 70 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 AC008133.2-201ENST00000624540 351 ntBASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 ST5-237ENST00000530991 3396 ntTSL 2 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KRTAP4-11Q9BYQ6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms