Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 Z82202.1-201ENST00000623446 1880 ntBASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCN10AQ9Y5Y9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 KRT17P6-201ENST00000453795 1220 ntBASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCN10AQ9Y5Y9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 TSPY22P-201ENST00000427496 604 ntBASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 AC004870.1-201ENST00000315132 882 ntBASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.81■□□□□ 0.92
SCN10AQ9Y5Y9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 AL109659.2-201ENST00000606809 1674 ntBASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCN10AQ9Y5Y9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 AC104390.1-201ENST00000555663 520 ntBASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 AC010240.3-201ENST00000607688 395 ntBASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCN10AQ9Y5Y9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms