Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 KRT8P3-201ENST00000519669 1449 ntBASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 SLC25A6P4-201ENST00000586535 553 ntBASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTCBQ9Y3I0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.96■■□□□ 1.43
RTCBQ9Y3I0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RTCBQ9Y3I0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RTCBQ9Y3I0 Z83836.1-201ENST00000624605 1642 ntBASIC23.95■■□□□ 1.43
RTCBQ9Y3I0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
RTCBQ9Y3I0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 AC104819.1-201ENST00000504587 486 ntBASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 AC079776.4-201ENST00000511039 504 ntBASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTCBQ9Y3I0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 AL662844.1-201ENST00000546340 181 ntBASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RTCBQ9Y3I0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 AC090616.6-201ENST00000582640 721 ntBASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTCBQ9Y3I0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 AC138894.3-201ENST00000603787 634 ntBASIC23.92■■□□□ 1.42
RTCBQ9Y3I0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms