Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.06■□□□□ 0.48
LRCH1Q9Y2L9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH1Q9Y2L9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCH1Q9Y2L9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 POU5F1P4-201ENST00000413175 1085 ntBASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 AL162430.1-201ENST00000480705 870 ntBASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 IRX1P1-201ENST00000438849 1838 ntBASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRCH1Q9Y2L9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 AC018695.7-201ENST00000624587 2492 ntBASIC18.04■□□□□ 0.48
LRCH1Q9Y2L9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 CCDC92B-201ENST00000575506 885 ntBASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 TERF1P2-201ENST00000583350 1212 ntBASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 KRT16P6-202ENST00000425692 1426 ntBASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRCH1Q9Y2L9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms