Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC3Q9UN70 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 AL031598.1-201ENST00000561511 1773 ntBASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 KRT8P32-201ENST00000512863 1461 ntBASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC3Q9UN70 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 KRT17P2-201ENST00000300992 1314 ntBASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 UNC93B2-201ENST00000285383 730 ntBASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC3Q9UN70 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AC004408.2-201ENST00000623613 2777 ntBASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AL512353.2-201ENST00000448759 1962 ntBASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 CA15P1-201ENST00000481698 905 ntBASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 AC068587.9-201ENST00000641814 219 ntBASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 HEIH-201ENST00000623091 1652 ntBASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGC3Q9UN70 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms