Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 PHGDH-210ENST00000641115 1638 ntBASIC14.66□□□□□ -0.06
NOTCH3Q9UM47 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 CA15P1-201ENST00000481698 905 ntBASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 AC128688.1-201ENST00000487626 519 ntBASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 KRT8P41-201ENST00000533985 1514 ntBASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 AL441883.1-201ENST00000566170 1045 ntBASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 AC069148.1-201ENST00000608741 768 ntBASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.65□□□□□ -0.06
NOTCH3Q9UM47 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 HOMER2P1-201ENST00000455653 964 ntBASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 RN7SL510P-201ENST00000581311 263 ntBASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 AC141257.4-201ENST00000634557 245 ntBASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 AC136944.6-201ENST00000634818 245 ntBASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.64□□□□□ -0.07
NOTCH3Q9UM47 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.63□□□□□ -0.07
NOTCH3Q9UM47 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NOTCH3Q9UM47 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NOTCH3Q9UM47 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NOTCH3Q9UM47 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NOTCH3Q9UM47 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
NOTCH3Q9UM47 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NOTCH3Q9UM47 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms