Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 INGX-201ENST00000359239 846 ntBASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 AC007663.1-201ENST00000438948 1240 ntBASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 AC128688.1-201ENST00000487626 519 ntBASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 AC133561.5-201ENST00000635547 218 ntBASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 AC097493.4-201ENST00000641197 219 ntBASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM248Q9NWD8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 AC008622.2-201ENST00000617006 1229 ntBASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 AC010653.2-201ENST00000623505 997 ntBASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM248Q9NWD8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 AC211429.1-201ENST00000415277 523 ntBASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 KRT18P22-201ENST00000402024 1347 ntBASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM248Q9NWD8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM248Q9NWD8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM248Q9NWD8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.39■□□□□ 0.7
TMEM248Q9NWD8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
TMEM248Q9NWD8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM248Q9NWD8 AL512353.2-201ENST00000448759 1962 ntBASIC19.39■□□□□ 0.7
TMEM248Q9NWD8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.39■□□□□ 0.7
TMEM248Q9NWD8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 AP003041.3-201ENST00000527151 707 ntBASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM248Q9NWD8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM248Q9NWD8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms