Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 AC026366.1-201ENST00000488803 879 ntBASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 AC073648.6-201ENST00000641589 218 ntBASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 KRT18P68-201ENST00000392293 1000 ntBASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCM2LQ9NUG4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCM2LQ9NUG4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 AC067852.2-201ENST00000590513 2313 ntBASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 UBE2SP1-201ENST00000450587 669 ntBASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCM2LQ9NUG4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms