Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 AC022211.2-201ENST00000585075 2527 ntBASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMCO4Q9NRQ5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 AC103702.1-201ENST00000548801 2630 ntBASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 MIR639-201ENST00000384974 98 ntBASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.94□□□□□ -0.02
SMCO4Q9NRQ5 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 ANO7L1-203ENST00000602586 1720 ntBASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 PCDH8P1-201ENST00000428983 2773 ntBASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SMCO4Q9NRQ5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms