Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSU72Q9NP77 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSU72Q9NP77 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSU72Q9NP77 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSU72Q9NP77 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.87■□□□□ 0.61
SSU72Q9NP77 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 AC006557.6-201ENST00000623071 864 ntBASIC18.86■□□□□ 0.61
SSU72Q9NP77 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.86■□□□□ 0.61
SSU72Q9NP77 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSU72Q9NP77 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSU72Q9NP77 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSU72Q9NP77 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSU72Q9NP77 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSU72Q9NP77 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSU72Q9NP77 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSU72Q9NP77 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSU72Q9NP77 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SSU72Q9NP77 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.84■□□□□ 0.61
SSU72Q9NP77 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSU72Q9NP77 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.84■□□□□ 0.61
SSU72Q9NP77 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SSU72Q9NP77 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.83■□□□□ 0.61
SSU72Q9NP77 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SSU72Q9NP77 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SSU72Q9NP77 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSU72Q9NP77 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.83■□□□□ 0.61
SSU72Q9NP77 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSU72Q9NP77 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SSU72Q9NP77 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSU72Q9NP77 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
SSU72Q9NP77 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms