Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 AC093525.10-201ENST00000625130 1569 ntBASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 KRT16P1-201ENST00000399124 1418 ntBASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC40Q9H9A6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 AF186192.3-201ENST00000583427 947 ntBASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRRC40Q9H9A6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 AC026271.3-201ENST00000571884 352 ntBASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 AC083906.6-201ENST00000641366 219 ntBASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC40Q9H9A6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC40Q9H9A6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC40Q9H9A6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC40Q9H9A6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC40Q9H9A6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.27■□□□□ 0.67
LRRC40Q9H9A6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LRRC40Q9H9A6 AL031598.1-201ENST00000561511 1773 ntBASIC19.27■□□□□ 0.67
LRRC40Q9H9A6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC40Q9H9A6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms