Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS11Q9H270 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
VPS11Q9H270 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.12■□□□□ 0.65
VPS11Q9H270 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.12■□□□□ 0.65
VPS11Q9H270 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.12■□□□□ 0.65
VPS11Q9H270 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
VPS11Q9H270 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.12■□□□□ 0.65
VPS11Q9H270 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS11Q9H270 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VPS11Q9H270 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS11Q9H270 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS11Q9H270 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VPS11Q9H270 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS11Q9H270 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.11■□□□□ 0.65
VPS11Q9H270 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.11■□□□□ 0.65
VPS11Q9H270 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.11■□□□□ 0.65
VPS11Q9H270 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VPS11Q9H270 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS11Q9H270 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
VPS11Q9H270 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS11Q9H270 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS11Q9H270 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VPS11Q9H270 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.1■□□□□ 0.65
VPS11Q9H270 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS11Q9H270 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.1■□□□□ 0.65
VPS11Q9H270 AC097658.1-201ENST00000475555 843 ntBASIC19.1■□□□□ 0.65
VPS11Q9H270 MIR4758-201ENST00000577688 71 ntBASIC19.1■□□□□ 0.65
VPS11Q9H270 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 HLA-B-256ENST00000639848 1089 ntBASIC19.1■□□□□ 0.65
VPS11Q9H270 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS11Q9H270 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS11Q9H270 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
VPS11Q9H270 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VPS11Q9H270 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VPS11Q9H270 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VPS11Q9H270 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS11Q9H270 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.09■□□□□ 0.65
VPS11Q9H270 GUSBP6-202ENST00000438529 1198 ntBASIC19.09■□□□□ 0.65
VPS11Q9H270 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.09■□□□□ 0.65
VPS11Q9H270 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VPS11Q9H270 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS11Q9H270 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
VPS11Q9H270 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS11Q9H270 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS11Q9H270 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VPS11Q9H270 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VPS11Q9H270 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS11Q9H270 AC068880.1-201ENST00000507289 2297 ntBASIC19.08■□□□□ 0.65
VPS11Q9H270 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VPS11Q9H270 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VPS11Q9H270 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS11Q9H270 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.08■□□□□ 0.65
VPS11Q9H270 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.08■□□□□ 0.65
VPS11Q9H270 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS11Q9H270 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms