Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 AL160286.2-201ENST00000567150 934 ntBASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PHACTR1Q9C0D0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 C1QL1P1-201ENST00000568105 661 ntBASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PHACTR1Q9C0D0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.27■□□□□ 0.67
PHACTR1Q9C0D0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PHACTR1Q9C0D0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
PHACTR1Q9C0D0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PHACTR1Q9C0D0 HEIH-201ENST00000623091 1652 ntBASIC19.27■□□□□ 0.67
PHACTR1Q9C0D0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PHACTR1Q9C0D0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PHACTR1Q9C0D0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 NCF1B-203ENST00000435988 1254 ntBASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 SOX15-203ENST00000570788 1093 ntBASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 HLA-A-209ENST00000638375 975 ntBASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 AC005332.8-201ENST00000622750 2735 ntBASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PHACTR1Q9C0D0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 AC083880.1-201ENST00000608266 535 ntBASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PHACTR1Q9C0D0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms