Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 MIR4758-201ENST00000577688 71 ntBASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 AC060766.5-201ENST00000590539 871 ntBASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 AC083880.1-201ENST00000608266 535 ntBASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 NCF1B-203ENST00000435988 1254 ntBASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 BICD1-207ENST00000551848 1962 ntBASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HDHD3Q9BSH5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 AL138781.1-201ENST00000566567 1274 ntBASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.03■□□□□ 0.16
HDHD3Q9BSH5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 AL354751.1-201ENST00000412768 1863 ntBASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.02■□□□□ 0.16
HDHD3Q9BSH5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms