Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 KRT18P31-201ENST00000506277 1292 ntBASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 AL157888.1-201ENST00000631930 593 ntBASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 AC020907.5-201ENST00000624372 1936 ntBASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
NECTIN4Q96NY8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 AC079781.3-201ENST00000449110 356 ntBASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 TOB2P1-201ENST00000469761 992 ntBASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 FOSL1P1-201ENST00000511041 816 ntBASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 AC026310.3-201ENST00000625186 2373 ntBASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NECTIN4Q96NY8 AP005212.1-201ENST00000581547 1997 ntBASIC19.64■□□□□ 0.74
NECTIN4Q96NY8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NECTIN4Q96NY8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.64■□□□□ 0.74
NECTIN4Q96NY8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 AC104819.1-201ENST00000504587 486 ntBASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 AP002469.2-201ENST00000531724 424 ntBASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 AC090616.6-201ENST00000582640 721 ntBASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NECTIN4Q96NY8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 ZNF815P-204ENST00000434898 1737 ntBASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NECTIN4Q96NY8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms