Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.11■□□□□ 0.81
CALR3Q96L12 AC004264.1-201ENST00000608354 794 ntBASIC20.11■□□□□ 0.81
CALR3Q96L12 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.11■□□□□ 0.81
CALR3Q96L12 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 AL354751.1-201ENST00000412768 1863 ntBASIC20.11■□□□□ 0.81
CALR3Q96L12 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CALR3Q96L12 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CALR3Q96L12 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALR3Q96L12 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CALR3Q96L12 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CALR3Q96L12 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CALR3Q96L12 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALR3Q96L12 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.1■□□□□ 0.81
CALR3Q96L12 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CALR3Q96L12 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.1■□□□□ 0.81
CALR3Q96L12 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.1■□□□□ 0.81
CALR3Q96L12 C1QL1P1-201ENST00000568105 661 ntBASIC20.1■□□□□ 0.81
CALR3Q96L12 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.1■□□□□ 0.81
CALR3Q96L12 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.1■□□□□ 0.81
CALR3Q96L12 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.1■□□□□ 0.81
CALR3Q96L12 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALR3Q96L12 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
CALR3Q96L12 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.1■□□□□ 0.81
CALR3Q96L12 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CALR3Q96L12 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.1■□□□□ 0.81
CALR3Q96L12 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.09■□□□□ 0.81
CALR3Q96L12 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CALR3Q96L12 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CALR3Q96L12 AIRN-201ENST00000601203 4374 ntBASIC20.09■□□□□ 0.81
CALR3Q96L12 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CALR3Q96L12 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.09■□□□□ 0.81
CALR3Q96L12 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.09■□□□□ 0.81
CALR3Q96L12 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.09■□□□□ 0.81
CALR3Q96L12 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.09■□□□□ 0.81
CALR3Q96L12 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CALR3Q96L12 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CALR3Q96L12 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CALR3Q96L12 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CALR3Q96L12 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.08■□□□□ 0.81
CALR3Q96L12 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.08■□□□□ 0.81
CALR3Q96L12 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.08■□□□□ 0.81
CALR3Q96L12 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CALR3Q96L12 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.08■□□□□ 0.81
CALR3Q96L12 AC069152.1-201ENST00000438030 544 ntBASIC20.08■□□□□ 0.81
CALR3Q96L12 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.08■□□□□ 0.81
CALR3Q96L12 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.08■□□□□ 0.81
CALR3Q96L12 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CALR3Q96L12 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.08■□□□□ 0.81
CALR3Q96L12 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CALR3Q96L12 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CALR3Q96L12 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CALR3Q96L12 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CALR3Q96L12 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CALR3Q96L12 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CALR3Q96L12 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.08■□□□□ 0.8
CALR3Q96L12 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.07■□□□□ 0.8
CALR3Q96L12 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.07■□□□□ 0.8
CALR3Q96L12 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.07■□□□□ 0.8
CALR3Q96L12 NBPF21P-201ENST00000425093 1451 ntBASIC20.07■□□□□ 0.8
CALR3Q96L12 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CALR3Q96L12 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.07■□□□□ 0.8
CALR3Q96L12 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.07■□□□□ 0.8
CALR3Q96L12 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.07■□□□□ 0.8
CALR3Q96L12 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 HLA-A-209ENST00000638375 975 ntBASIC20.07■□□□□ 0.8
CALR3Q96L12 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CALR3Q96L12 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CALR3Q96L12 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms