Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IFT43Q96FT9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.57■□□□□ 0.72
IFT43Q96FT9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 AP002982.1-201ENST00000492365 877 ntBASIC19.56■□□□□ 0.72
IFT43Q96FT9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 AC012306.2-201ENST00000609350 630 ntBASIC19.56■□□□□ 0.72
IFT43Q96FT9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 AC005332.7-201ENST00000614046 2005 ntBASIC19.56■□□□□ 0.72
IFT43Q96FT9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IFT43Q96FT9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.56■□□□□ 0.72
IFT43Q96FT9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 TSPY15P-201ENST00000457163 923 ntBASIC19.55■□□□□ 0.72
IFT43Q96FT9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 AC133561.5-201ENST00000635547 218 ntBASIC19.55■□□□□ 0.72
IFT43Q96FT9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IFT43Q96FT9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.55■□□□□ 0.72
IFT43Q96FT9 AC104417.2-201ENST00000562989 1793 ntBASIC19.55■□□□□ 0.72
IFT43Q96FT9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IFT43Q96FT9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IFT43Q96FT9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IFT43Q96FT9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IFT43Q96FT9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IFT43Q96FT9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
IFT43Q96FT9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IFT43Q96FT9 AL032819.2-201ENST00000624543 2162 ntBASIC19.54■□□□□ 0.72
IFT43Q96FT9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
IFT43Q96FT9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.53■□□□□ 0.72
IFT43Q96FT9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
IFT43Q96FT9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
IFT43Q96FT9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.53■□□□□ 0.72
IFT43Q96FT9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
IFT43Q96FT9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms