Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 KRT8P9-201ENST00000558927 1449 ntBASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 AC020763.4-201ENST00000623414 4170 ntBASIC18.8■□□□□ 0.6
SH3KBP1Q96B97 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 AC128688.1-201ENST00000487626 519 ntBASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 AC010947.1-201ENST00000623454 693 ntBASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH3KBP1Q96B97 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 CYP2D8P-201ENST00000433633 1490 ntBASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 AC093484.2-201ENST00000580996 2166 ntBASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 EGLN1P1-201ENST00000531623 762 ntBASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
SH3KBP1Q96B97 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SH3KBP1Q96B97 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms