Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MIR4674-201ENST00000582457 87 ntBASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 AL358472.4-201ENST00000633140 710 ntBASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 AL359075.1-203ENST00000462729 1002 ntBASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3RF2Q8TEC5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SH3RF2Q8TEC5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AP000523.1-201ENST00000398242 1049 ntBASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AC091076.1-201ENST00000610741 619 ntBASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AC007952.6-201ENST00000573168 2673 ntBASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 AC003957.1-201ENST00000625108 2673 ntBASIC19.69■□□□□ 0.74
SH3RF2Q8TEC5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3RF2Q8TEC5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms