Protein–RNA interactions for Protein: Q8TDI7

TMC2, Transmembrane channel-like protein 2, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC2Q8TDI7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMC2Q8TDI7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
TMC2Q8TDI7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMC2Q8TDI7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.54■□□□□ 0.88
TMC2Q8TDI7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMC2Q8TDI7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.54■□□□□ 0.88
TMC2Q8TDI7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMC2Q8TDI7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMC2Q8TDI7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 CA15P1-201ENST00000481698 905 ntBASIC20.53■□□□□ 0.88
TMC2Q8TDI7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 FITM1-202ENST00000559294 800 ntBASIC20.53■□□□□ 0.88
TMC2Q8TDI7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMC2Q8TDI7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 AP000525.1-201ENST00000608286 694 ntBASIC20.52■□□□□ 0.88
TMC2Q8TDI7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.52■□□□□ 0.88
TMC2Q8TDI7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMC2Q8TDI7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMC2Q8TDI7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMC2Q8TDI7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMC2Q8TDI7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMC2Q8TDI7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 AC087289.5-201ENST00000586076 3175 ntBASIC20.51■□□□□ 0.87
TMC2Q8TDI7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC2Q8TDI7 CROCCP3-202ENST00000420820 1947 ntBASIC20.51■□□□□ 0.87
TMC2Q8TDI7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 KRT8P32-201ENST00000512863 1461 ntBASIC20.5■□□□□ 0.87
TMC2Q8TDI7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 AC093525.10-201ENST00000625130 1569 ntBASIC20.5■□□□□ 0.87
TMC2Q8TDI7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC2Q8TDI7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms