Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 RASA4CP-201ENST00000424092 1398 ntBASIC14.22□□□□□ -0.13
NUP35Q8NFH5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.21□□□□□ -0.13
NUP35Q8NFH5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 PCDHA12-202ENST00000613593 2588 ntBASIC14.21□□□□□ -0.13
NUP35Q8NFH5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NUP35Q8NFH5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP35Q8NFH5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP35Q8NFH5 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.21□□□□□ -0.14
NUP35Q8NFH5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
NUP35Q8NFH5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NUP35Q8NFH5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NUP35Q8NFH5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP35Q8NFH5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 AP001330.3-201ENST00000520123 633 ntBASIC14.2□□□□□ -0.14
NUP35Q8NFH5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 FEM1AP3-201ENST00000403722 1741 ntBASIC14.2□□□□□ -0.14
NUP35Q8NFH5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP35Q8NFH5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 AC104417.2-201ENST00000562989 1793 ntBASIC14.19□□□□□ -0.14
NUP35Q8NFH5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 YBX1P1-201ENST00000445822 960 ntBASIC14.19□□□□□ -0.14
NUP35Q8NFH5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.19□□□□□ -0.14
NUP35Q8NFH5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms