Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC89Q8N998 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.72■□□□□ 0.75
CCDC89Q8N998 UNC93B4-201ENST00000505679 747 ntBASIC19.72■□□□□ 0.75
CCDC89Q8N998 PRKY-204ENST00000533551 1019 ntBASIC19.72■□□□□ 0.75
CCDC89Q8N998 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC89Q8N998 AC104771.1-201ENST00000603335 964 ntBASIC19.72■□□□□ 0.75
CCDC89Q8N998 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC89Q8N998 AC135050.7-201ENST00000624508 2218 ntBASIC19.72■□□□□ 0.75
CCDC89Q8N998 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC89Q8N998 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC89Q8N998 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 AC005082.1-201ENST00000413042 2259 ntBASIC19.71■□□□□ 0.75
CCDC89Q8N998 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 AC092666.2-201ENST00000613287 246 ntBASIC19.71■□□□□ 0.75
CCDC89Q8N998 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 AC007613.1-201ENST00000572811 2597 ntBASIC19.71■□□□□ 0.75
CCDC89Q8N998 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC89Q8N998 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC89Q8N998 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 POM121L13P-201ENST00000422362 380 ntBASIC19.7■□□□□ 0.74
CCDC89Q8N998 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 AC142086.2-201ENST00000569753 217 ntBASIC19.7■□□□□ 0.74
CCDC89Q8N998 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC89Q8N998 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCDC89Q8N998 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC89Q8N998 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms