Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APLFQ8IW19 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.81■□□□□ 0.6
APLFQ8IW19 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.81■□□□□ 0.6
APLFQ8IW19 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APLFQ8IW19 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.81■□□□□ 0.6
APLFQ8IW19 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.81■□□□□ 0.6
APLFQ8IW19 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APLFQ8IW19 AC113410.3-201ENST00000623366 203 ntBASIC18.81■□□□□ 0.6
APLFQ8IW19 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APLFQ8IW19 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
APLFQ8IW19 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APLFQ8IW19 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
APLFQ8IW19 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.81■□□□□ 0.6
APLFQ8IW19 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APLFQ8IW19 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.81■□□□□ 0.6
APLFQ8IW19 TREX1-205ENST00000625293 1783 ntBASIC18.81■□□□□ 0.6
APLFQ8IW19 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.81■□□□□ 0.6
APLFQ8IW19 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.81■□□□□ 0.6
APLFQ8IW19 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.8■□□□□ 0.6
APLFQ8IW19 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
APLFQ8IW19 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 PRKY-204ENST00000533551 1019 ntBASIC18.8■□□□□ 0.6
APLFQ8IW19 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.8■□□□□ 0.6
APLFQ8IW19 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.8■□□□□ 0.6
APLFQ8IW19 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.8■□□□□ 0.6
APLFQ8IW19 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APLFQ8IW19 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APLFQ8IW19 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
APLFQ8IW19 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.79■□□□□ 0.6
APLFQ8IW19 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.79■□□□□ 0.6
APLFQ8IW19 AC139713.2-201ENST00000641328 2723 ntBASIC18.79■□□□□ 0.6
APLFQ8IW19 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
APLFQ8IW19 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.79■□□□□ 0.6
APLFQ8IW19 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.79■□□□□ 0.6
APLFQ8IW19 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.79■□□□□ 0.6
APLFQ8IW19 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.79■□□□□ 0.6
APLFQ8IW19 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 AC010331.1-201ENST00000611423 582 ntBASIC18.79■□□□□ 0.6
APLFQ8IW19 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.79■□□□□ 0.6
APLFQ8IW19 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.79■□□□□ 0.6
APLFQ8IW19 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
APLFQ8IW19 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.79■□□□□ 0.6
APLFQ8IW19 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APLFQ8IW19 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.78■□□□□ 0.6
APLFQ8IW19 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.78■□□□□ 0.6
APLFQ8IW19 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.78■□□□□ 0.6
APLFQ8IW19 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.78■□□□□ 0.6
APLFQ8IW19 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.78■□□□□ 0.6
APLFQ8IW19 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
APLFQ8IW19 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
APLFQ8IW19 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.78■□□□□ 0.6
APLFQ8IW19 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.78■□□□□ 0.6
APLFQ8IW19 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.78■□□□□ 0.6
APLFQ8IW19 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
APLFQ8IW19 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APLFQ8IW19 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APLFQ8IW19 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms