Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CRLF3Q8IUI8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 AL354751.1-201ENST00000412768 1863 ntBASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CRLF3Q8IUI8 AL133373.2-201ENST00000623187 2828 ntBASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CRLF3Q8IUI8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CRLF3Q8IUI8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 TFP1-202ENST00000475455 1573 ntBASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CRLF3Q8IUI8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms