Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ENPP3-205ENST00000427707 1536 ntTSL 1 (best)9.26□□□□□ -0.934e-7■■□□□ 12.5
SND1Q7KZF4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.214e-7■■□□□ 12.5
SND1Q7KZF4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.274e-7■■□□□ 12.5
SND1Q7KZF4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.45□□□□□ -1.544e-7■■□□□ 12.5
SND1Q7KZF4 CERS2-202ENST00000345896 2170 ntTSL 232.34■■■□□ 2.771e-7■■□□□ 12.5
SND1Q7KZF4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.421e-7■■□□□ 12.5
SND1Q7KZF4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.11e-7■■□□□ 12.5
SND1Q7KZF4 CERS2-208ENST00000460664 850 ntTSL 315.43■□□□□ 0.061e-7■■□□□ 12.5
SND1Q7KZF4 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC13.5□□□□□ -0.251e-7■■□□□ 12.5
SND1Q7KZF4 UQCRC2-204ENST00000563711 2008 ntTSL 210.79□□□□□ -0.684e-7■■□□□ 12.5
SND1Q7KZF4 UQCRC2-211ENST00000567810 582 ntTSL 36.92□□□□□ -1.34e-7■■□□□ 12.5
SND1Q7KZF4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.36■■□□□ 1.659e-6■■□□□ 12.5
SND1Q7KZF4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.489e-6■■□□□ 12.5
SND1Q7KZF4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.343e-8■■□□□ 12.5
SND1Q7KZF4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.04■■□□□ 1.129e-6■■□□□ 12.5
SND1Q7KZF4 MVD-209ENST00000565149 2352 ntTSL 1 (best)21.48■■□□□ 1.033e-8■■□□□ 12.5
SND1Q7KZF4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.61■□□□□ 0.739e-6■■□□□ 12.5
SND1Q7KZF4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.359e-6■■□□□ 12.5
SND1Q7KZF4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.269e-6■■□□□ 12.5
SND1Q7KZF4 MARS-211ENST00000548202 796 ntTSL 216.18■□□□□ 0.181e-10■■□□□ 12.5
SND1Q7KZF4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.92■□□□□ 0.149e-6■■□□□ 12.5
SND1Q7KZF4 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.039e-6■■□□□ 12.5
SND1Q7KZF4 MARS-215ENST00000548944 294 ntTSL 314.48□□□□□ -0.091e-10■■□□□ 12.5
SND1Q7KZF4 CISH-203ENST00000491847 5042 ntTSL 1 (best)14.46□□□□□ -0.099e-6■■□□□ 12.5
SND1Q7KZF4 HRC-203ENST00000595625 2044 ntTSL 5 BASIC13.64□□□□□ -0.239e-6■■□□□ 12.5
SND1Q7KZF4 RAB2A-205ENST00000466595 866 ntTSL 312.38□□□□□ -0.439e-6■■□□□ 12.5
SND1Q7KZF4 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC10.66□□□□□ -0.79e-6■■□□□ 12.5
SND1Q7KZF4 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.779e-6■■□□□ 12.5
SND1Q7KZF4 MARS-222ENST00000551172 699 ntTSL 39.5□□□□□ -0.891e-10■■□□□ 12.5
SND1Q7KZF4 MACC1-203ENST00000471019 304 ntTSL 39.23□□□□□ -0.939e-6■■□□□ 12.5
SND1Q7KZF4 MACC1-204ENST00000483317 608 ntTSL 28.56□□□□□ -1.049e-6■■□□□ 12.5
SND1Q7KZF4 SAMSN1-205ENST00000493640 282 ntTSL 38.28□□□□□ -1.089e-6■■□□□ 12.5
SND1Q7KZF4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC8.15□□□□□ -1.19e-6■■□□□ 12.5
SND1Q7KZF4 PDIA5-204ENST00000472319 395 ntTSL 57.63□□□□□ -1.199e-6■■□□□ 12.5
SND1Q7KZF4 RAB2A-206ENST00000481569 506 ntTSL 27.45□□□□□ -1.229e-6■■□□□ 12.5
SND1Q7KZF4 MARS-229ENST00000552499 555 ntTSL 37.3□□□□□ -1.241e-10■■□□□ 12.5
SND1Q7KZF4 RAB2A-210ENST00000531098 566 ntTSL 26.83□□□□□ -1.329e-6■■□□□ 12.5
SND1Q7KZF4 RAB2A-212ENST00000534260 410 ntTSL 46.53□□□□□ -1.369e-6■■□□□ 12.5
SND1Q7KZF4 MARS-230ENST00000552914 734 ntTSL 36.44□□□□□ -1.381e-10■■□□□ 12.5
SND1Q7KZF4 GFPT1-203ENST00000493759 524 ntTSL 56.39□□□□□ -1.393e-8■■□□□ 12.5
SND1Q7KZF4 RAB2A-203ENST00000429861 594 ntTSL 25.96□□□□□ -1.469e-6■■□□□ 12.5
SND1Q7KZF4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.59e-6■■□□□ 12.5
SND1Q7KZF4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.69□□□□□ -1.59e-6■■□□□ 12.5
SND1Q7KZF4 CLIC2-204ENST00000491205 516 ntTSL 25.55□□□□□ -1.529e-6■■□□□ 12.5
SND1Q7KZF4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.09□□□□□ -1.599e-6■■□□□ 12.5
SND1Q7KZF4 MARS-224ENST00000551805 479 ntTSL 24.89□□□□□ -1.631e-10■■□□□ 12.5
SND1Q7KZF4 MARS-209ENST00000547665 670 ntTSL 24.5□□□□□ -1.691e-10■■□□□ 12.5
SND1Q7KZF4 ALDH1L2-203ENST00000549335 7403 ntTSL 24.2□□□□□ -1.749e-6■■□□□ 12.5
SND1Q7KZF4 P3H4-207ENST00000590496 505 ntAPPRIS ALT2 TSL 426.55■■□□□ 1.842e-10■■□□□ 12.5
SND1Q7KZF4 SLC5A9-207ENST00000525901 489 ntTSL 316.98■□□□□ 0.312e-10■■□□□ 12.5
SND1Q7KZF4 TXNDC15-205ENST00000506916 517 ntTSL 316.86■□□□□ 0.292e-10■■□□□ 12.5
SND1Q7KZF4 TXNDC15-210ENST00000511070 1006 ntTSL 1 (best)16.86■□□□□ 0.292e-10■■□□□ 12.5
SND1Q7KZF4 TXNDC15-208ENST00000508810 579 ntTSL 316.05■□□□□ 0.162e-10■■□□□ 12.5
SND1Q7KZF4 TXNDC15-201ENST00000358387 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.512e-10■■□□□ 12.5
SND1Q7KZF4 TXNDC15-206ENST00000507024 2893 ntTSL 1 (best)11.87□□□□□ -0.512e-10■■□□□ 12.5
SND1Q7KZF4 TXNDC15-207ENST00000508779 1477 ntAPPRIS ALT2 TSL 211.84□□□□□ -0.512e-10■■□□□ 12.5
SND1Q7KZF4 DNAJB11-203ENST00000464877 639 ntTSL 27.54□□□□□ -1.22e-7■■□□□ 12.5
SND1Q7KZF4 PTK7-211ENST00000473339 870 ntTSL 316.62■□□□□ 0.252e-7■■□□□ 12.5
SND1Q7KZF4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.65■□□□□ 0.744e-12■■□□□ 12.5
SND1Q7KZF4 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.084e-12■■□□□ 12.5
SND1Q7KZF4 XYLT2-202ENST00000376550 3267 ntTSL 1 (best)14.11□□□□□ -0.154e-12■■□□□ 12.5
SND1Q7KZF4 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)14.58□□□□□ -0.074e-9■■□□□ 12.5
SND1Q7KZF4 GTSF1-202ENST00000546575 458 ntTSL 25.4□□□□□ -1.545e-7■■□□□ 12.5
SND1Q7KZF4 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC12.28□□□□□ -0.442e-7■■□□□ 12.5
SND1Q7KZF4 PDIA5-208ENST00000495004 563 ntTSL 310.73□□□□□ -0.691e-6■■□□□ 12.5
SND1Q7KZF4 FN1-215ENST00000461974 571 ntTSL 27.16□□□□□ -1.262e-6■■□□□ 12.4
SND1Q7KZF4 FN1-222ENST00000485567 584 ntTSL 1 (best)7.11□□□□□ -1.272e-6■■□□□ 12.4
SND1Q7KZF4 TMEM2-204ENST00000377057 2637 ntTSL 211.03□□□□□ -0.643e-6■■□□□ 12.4
SND1Q7KZF4 C14orf2-210ENST00000555030 749 ntTSL 3 BASIC10.56□□□□□ -0.723e-15■■□□□ 12.4
SND1Q7KZF4 C14orf2-206ENST00000554287 361 ntTSL 310□□□□□ -0.813e-15■■□□□ 12.4
SND1Q7KZF4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.943e-15■■□□□ 12.4
SND1Q7KZF4 C14orf2-204ENST00000553449 271 ntTSL 29.17□□□□□ -0.943e-15■■□□□ 12.4
SND1Q7KZF4 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.953e-15■■□□□ 12.4
SND1Q7KZF4 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC8.75□□□□□ -1.013e-15■■□□□ 12.4
SND1Q7KZF4 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC8.63□□□□□ -1.033e-15■■□□□ 12.4
SND1Q7KZF4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.23e-15■■□□□ 12.4
SND1Q7KZF4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.16■□□□□ 0.824e-9■■□□□ 12.4
SND1Q7KZF4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.81■□□□□ 0.764e-9■■□□□ 12.4
SND1Q7KZF4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.13■□□□□ 0.334e-9■■□□□ 12.4
SND1Q7KZF4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.074e-9■■□□□ 12.4
SND1Q7KZF4 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.51e-6■■□□□ 12.4
SND1Q7KZF4 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.81e-6■■□□□ 12.4
SND1Q7KZF4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.514e-7■■□□□ 12.4
SND1Q7KZF4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.84e-7■■□□□ 12.4
SND1Q7KZF4 SLC22A18-207ENST00000463571 1030 ntTSL 519.18■□□□□ 0.664e-7■■□□□ 12.4
SND1Q7KZF4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.64e-7■■□□□ 12.4
SND1Q7KZF4 SLC22A18-205ENST00000449603 682 ntTSL 317.86■□□□□ 0.454e-7■■□□□ 12.4
SND1Q7KZF4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.34■□□□□ 0.374e-7■■□□□ 12.4
SND1Q7KZF4 SLC22A18-211ENST00000495518 588 ntTSL 216.77■□□□□ 0.284e-7■■□□□ 12.4
SND1Q7KZF4 SLC22A18-204ENST00000441077 831 ntTSL 515.57■□□□□ 0.084e-7■■□□□ 12.4
SND1Q7KZF4 ATP13A1-205ENST00000469641 4241 ntTSL 211.81□□□□□ -0.529e-7■■□□□ 12.4
SND1Q7KZF4 LAMC1-203ENST00000478064 782 ntTSL 55.7□□□□□ -1.55e-7■■□□□ 12.4
SND1Q7KZF4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.84■■□□□ 1.092e-7■■□□□ 12.4
SND1Q7KZF4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.243e-8■■□□□ 12.4
SND1Q7KZF4 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.294e-7■■□□□ 12.4
SND1Q7KZF4 NAGA-202ENST00000402937 1869 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.44e-7■■□□□ 12.4
SND1Q7KZF4 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.488e-11■■□□□ 12.4
SND1Q7KZF4 NAGA-203ENST00000403363 1856 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.534e-7■■□□□ 12.4
SND1Q7KZF4 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC10.72□□□□□ -0.698e-11■■□□□ 12.4
SND1Q7KZF4 PSMB3-210ENST00000618159 562 ntTSL 29.48□□□□□ -0.895e-18■■□□□ 12.4
Retrieved 100 of 13,567 protein–RNA pairs in 87.4 ms