Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.2■□□□□ 0.66
PACS1Q6VY07 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 FEM1AP3-201ENST00000403722 1741 ntBASIC19.2■□□□□ 0.66
PACS1Q6VY07 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PACS1Q6VY07 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 WIZP1-201ENST00000531444 2299 ntBASIC19.19■□□□□ 0.66
PACS1Q6VY07 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 AL512353.2-201ENST00000448759 1962 ntBASIC19.19■□□□□ 0.66
PACS1Q6VY07 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.19■□□□□ 0.66
PACS1Q6VY07 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PACS1Q6VY07 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 GCSHP5-201ENST00000443090 522 ntBASIC19.18■□□□□ 0.66
PACS1Q6VY07 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.18■□□□□ 0.66
PACS1Q6VY07 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PACS1Q6VY07 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 AIRN-201ENST00000601203 4374 ntBASIC19.17■□□□□ 0.66
PACS1Q6VY07 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms