Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 AL358472.4-201ENST00000633140 710 ntBASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 KRT8P3-201ENST00000519669 1449 ntBASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 AFG3L1P-217ENST00000557444 2447 ntBASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DCLRE1AQ6PJP8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 GPAT2P1-201ENST00000444924 1672 ntBASIC20.29■□□□□ 0.84
DCLRE1AQ6PJP8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 AL023284.2-201ENST00000405850 579 ntBASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 TEX21P-204ENST00000641479 1693 ntBASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DCLRE1AQ6PJP8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DCLRE1AQ6PJP8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms