Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CASC4Q6P4E1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 PKD1P1-201ENST00000458669 6805 ntBASIC19.38■□□□□ 0.69
CASC4Q6P4E1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 AP003097.1-201ENST00000530657 1135 ntBASIC19.38■□□□□ 0.69
CASC4Q6P4E1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 AC004264.1-201ENST00000608354 794 ntBASIC19.38■□□□□ 0.69
CASC4Q6P4E1 AL138781.2-201ENST00000617896 1843 ntBASIC19.38■□□□□ 0.69
CASC4Q6P4E1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CASC4Q6P4E1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.37■□□□□ 0.69
CASC4Q6P4E1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 KRT17P3-201ENST00000420566 1262 ntBASIC19.37■□□□□ 0.69
CASC4Q6P4E1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CASC4Q6P4E1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 NEFHP1-201ENST00000412845 2629 ntBASIC19.36■□□□□ 0.69
CASC4Q6P4E1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 AC008403.3-201ENST00000598924 454 ntBASIC19.36■□□□□ 0.69
CASC4Q6P4E1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASC4Q6P4E1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms