Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 AL032819.2-201ENST00000624543 2162 ntBASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEF20Q5VT98 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEF20Q5VT98 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PRAMEF20Q5VT98 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
PRAMEF20Q5VT98 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 TSPY17P-201ENST00000450329 467 ntBASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 AL023803.3-201ENST00000615559 522 ntBASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 SLC25A24-204ENST00000569674 2357 ntBASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRAMEF20Q5VT98 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 AP003041.3-201ENST00000527151 707 ntBASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 AL353719.1-201ENST00000566847 864 ntBASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRAMEF20Q5VT98 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 HMGA1P5-201ENST00000412453 271 ntBASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRAMEF20Q5VT98 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 AC116562.4-201ENST00000641316 2276 ntBASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRAMEF20Q5VT98 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms