Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 AC239809.2-201ENST00000415381 517 ntBASIC18.47■□□□□ 0.55
SGO1Q5FBB7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SGO1Q5FBB7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 HLA-A-209ENST00000638375 975 ntBASIC18.46■□□□□ 0.55
SGO1Q5FBB7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.46■□□□□ 0.55
SGO1Q5FBB7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.46■□□□□ 0.55
SGO1Q5FBB7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.46■□□□□ 0.54
SGO1Q5FBB7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 AL160286.2-201ENST00000567150 934 ntBASIC18.45■□□□□ 0.54
SGO1Q5FBB7 C1QL1P1-201ENST00000568105 661 ntBASIC18.45■□□□□ 0.54
SGO1Q5FBB7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SGO1Q5FBB7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.44■□□□□ 0.54
SGO1Q5FBB7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms