Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 AC018470.1-201ENST00000624790 3129 ntBASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RUNDC3AQ59EK9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RUNDC3AQ59EK9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
RUNDC3AQ59EK9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 TSPY6P-201ENST00000448518 926 ntBASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 AC006970.2-201ENST00000450065 779 ntBASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RUNDC3AQ59EK9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 AC008687.6-201ENST00000596318 630 ntBASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RUNDC3AQ59EK9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 AC005332.8-201ENST00000622750 2735 ntBASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 AC020763.4-201ENST00000623414 4170 ntBASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RUNDC3AQ59EK9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms