Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 KRT16P1-201ENST00000399124 1418 ntBASIC19.2■□□□□ 0.66
CDH17Q12864 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDH17Q12864 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH17Q12864 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.2■□□□□ 0.66
CDH17Q12864 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDH17Q12864 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH17Q12864 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.2■□□□□ 0.66
CDH17Q12864 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH17Q12864 AC083906.6-201ENST00000641366 219 ntBASIC19.2■□□□□ 0.66
CDH17Q12864 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDH17Q12864 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH17Q12864 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CDH17Q12864 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH17Q12864 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH17Q12864 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH17Q12864 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CDH17Q12864 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDH17Q12864 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH17Q12864 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH17Q12864 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.19■□□□□ 0.66
CDH17Q12864 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDH17Q12864 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDH17Q12864 AF186192.3-201ENST00000583427 947 ntBASIC19.19■□□□□ 0.66
CDH17Q12864 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDH17Q12864 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.19■□□□□ 0.66
CDH17Q12864 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH17Q12864 AL512353.2-201ENST00000448759 1962 ntBASIC19.19■□□□□ 0.66
CDH17Q12864 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH17Q12864 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH17Q12864 KRT8P11-201ENST00000409686 1436 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH17Q12864 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDH17Q12864 PRSS44-201ENST00000515154 1146 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH17Q12864 AC026271.3-201ENST00000571884 352 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 AC073195.1-201ENST00000607241 877 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH17Q12864 CR392000.1-201ENST00000624770 1228 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 AL031985.4-201ENST00000642138 673 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH17Q12864 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH17Q12864 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH17Q12864 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH17Q12864 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CDH17Q12864 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDH17Q12864 RCC2P6-201ENST00000526625 1557 ntBASIC19.18■□□□□ 0.66
CDH17Q12864 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CDH17Q12864 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH17Q12864 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH17Q12864 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH17Q12864 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH17Q12864 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 AC004951.3-201ENST00000418645 1148 ntBASIC19.17■□□□□ 0.66
CDH17Q12864 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH17Q12864 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH17Q12864 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms