Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 AL160286.2-201ENST00000567150 934 ntBASIC12.58□□□□□ -0.4
SYCNQ0VAF6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 AL023875.1-201ENST00000640777 796 ntBASIC12.58□□□□□ -0.4
SYCNQ0VAF6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 KRT16P5-201ENST00000455284 522 ntBASIC12.57□□□□□ -0.4
SYCNQ0VAF6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
SYCNQ0VAF6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 FP475955.4-201ENST00000623131 1990 ntBASIC12.56□□□□□ -0.4
SYCNQ0VAF6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 IRX1P1-201ENST00000438849 1838 ntBASIC12.56□□□□□ -0.4
SYCNQ0VAF6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 AC233263.1-201ENST00000578059 224 ntBASIC12.56□□□□□ -0.4
SYCNQ0VAF6 AC006058.3-201ENST00000606217 1069 ntBASIC12.56□□□□□ -0.4
SYCNQ0VAF6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms