Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS3P61009 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.45■□□□□ 0.06
SPCS3P61009 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SPCS3P61009 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS3P61009 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS3P61009 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.45■□□□□ 0.06
SPCS3P61009 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS3P61009 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS3P61009 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS3P61009 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.45■□□□□ 0.06
SPCS3P61009 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.45■□□□□ 0.06
SPCS3P61009 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SPCS3P61009 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SPCS3P61009 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 SDHAP1-207ENST00000440850 2000 ntBASIC15.44■□□□□ 0.06
SPCS3P61009 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.44■□□□□ 0.06
SPCS3P61009 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.44■□□□□ 0.06
SPCS3P61009 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.44■□□□□ 0.06
SPCS3P61009 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.44■□□□□ 0.06
SPCS3P61009 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.44■□□□□ 0.06
SPCS3P61009 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.44■□□□□ 0.06
SPCS3P61009 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 AC090164.3-201ENST00000610780 2143 ntBASIC15.44■□□□□ 0.06
SPCS3P61009 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.44■□□□□ 0.06
SPCS3P61009 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SPCS3P61009 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.44■□□□□ 0.06
SPCS3P61009 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SPCS3P61009 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SPCS3P61009 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SPCS3P61009 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 AC009113.1-201ENST00000570267 2443 ntBASIC15.43■□□□□ 0.06
SPCS3P61009 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 BX276092.2-201ENST00000417668 665 ntBASIC15.43■□□□□ 0.06
SPCS3P61009 YBX1P10-201ENST00000444752 975 ntBASIC15.43■□□□□ 0.06
SPCS3P61009 AF201337.1-201ENST00000520239 748 ntBASIC15.43■□□□□ 0.06
SPCS3P61009 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.43■□□□□ 0.06
SPCS3P61009 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.43■□□□□ 0.06
SPCS3P61009 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 WIZP1-201ENST00000531444 2299 ntBASIC15.43■□□□□ 0.06
SPCS3P61009 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SPCS3P61009 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.43■□□□□ 0.06
SPCS3P61009 AP006587.1-201ENST00000534129 1502 ntBASIC15.43■□□□□ 0.06
SPCS3P61009 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPCS3P61009 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPCS3P61009 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.42■□□□□ 0.06
SPCS3P61009 AC141586.5-201ENST00000624546 2050 ntBASIC15.42■□□□□ 0.06
SPCS3P61009 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms