Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN20P56880 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN20P56880 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN20P56880 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.42■□□□□ 0.38
CLDN20P56880 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN20P56880 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN20P56880 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN20P56880 REXO1L10P-201ENST00000615707 1290 ntBASIC17.42■□□□□ 0.38
CLDN20P56880 REXO1L12P-201ENST00000622156 912 ntBASIC17.42■□□□□ 0.38
CLDN20P56880 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 TREX1-205ENST00000625293 1783 ntBASIC17.42■□□□□ 0.38
CLDN20P56880 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN20P56880 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CLDN20P56880 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLDN20P56880 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN20P56880 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN20P56880 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN20P56880 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLDN20P56880 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CLDN20P56880 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 LTB4R2-202ENST00000528054 3092 ntBASIC17.41■□□□□ 0.38
CLDN20P56880 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN20P56880 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN20P56880 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN20P56880 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN20P56880 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN20P56880 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN20P56880 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN20P56880 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN20P56880 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN20P56880 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLDN20P56880 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN20P56880 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN20P56880 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN20P56880 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.4■□□□□ 0.38
CLDN20P56880 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN20P56880 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.4■□□□□ 0.38
CLDN20P56880 AC116562.2-201ENST00000507042 360 ntBASIC17.4■□□□□ 0.38
CLDN20P56880 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 AL160286.2-201ENST00000567150 934 ntBASIC17.4■□□□□ 0.38
CLDN20P56880 AC026271.3-201ENST00000571884 352 ntBASIC17.4■□□□□ 0.38
CLDN20P56880 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN20P56880 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN20P56880 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLDN20P56880 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN20P56880 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN20P56880 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN20P56880 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN20P56880 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN20P56880 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN20P56880 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN20P56880 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN20P56880 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CLDN20P56880 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN20P56880 MESTP1-201ENST00000404287 994 ntBASIC17.39■□□□□ 0.37
CLDN20P56880 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN20P56880 AC011506.1-201ENST00000474329 610 ntBASIC17.39■□□□□ 0.37
CLDN20P56880 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN20P56880 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CLDN20P56880 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN20P56880 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN20P56880 MIR6786-201ENST00000616843 113 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms