Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.77■□□□□ 0.76
CDH6P55285 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH6P55285 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.77■□□□□ 0.76
CDH6P55285 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH6P55285 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.77■□□□□ 0.76
CDH6P55285 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CDH6P55285 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH6P55285 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CDH6P55285 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
CDH6P55285 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.77■□□□□ 0.75
CDH6P55285 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDH6P55285 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH6P55285 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH6P55285 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDH6P55285 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH6P55285 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH6P55285 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH6P55285 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH6P55285 AC073195.1-201ENST00000607241 877 ntBASIC19.76■□□□□ 0.75
CDH6P55285 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDH6P55285 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH6P55285 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH6P55285 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH6P55285 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
CDH6P55285 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 RNF165-205ENST00000588679 2904 ntBASIC19.75■□□□□ 0.75
CDH6P55285 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDH6P55285 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDH6P55285 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH6P55285 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH6P55285 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH6P55285 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH6P55285 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CDH6P55285 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH6P55285 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH6P55285 RCC2P6-201ENST00000526625 1557 ntBASIC19.74■□□□□ 0.75
CDH6P55285 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH6P55285 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.74■□□□□ 0.75
CDH6P55285 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH6P55285 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH6P55285 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CDH6P55285 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH6P55285 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH6P55285 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CDH6P55285 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.74■□□□□ 0.75
CDH6P55285 AL031985.4-201ENST00000642138 673 ntBASIC19.74■□□□□ 0.75
CDH6P55285 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 KRT8P11-201ENST00000409686 1436 ntBASIC19.74■□□□□ 0.75
CDH6P55285 AL135905.2-201ENST00000584934 1404 ntBASIC19.74■□□□□ 0.75
CDH6P55285 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CDH6P55285 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH6P55285 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH6P55285 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH6P55285 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms