Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.61■□□□□ 0.73
PMS2P54278 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.61■□□□□ 0.73
PMS2P54278 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.61■□□□□ 0.73
PMS2P54278 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS2P54278 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.61■□□□□ 0.73
PMS2P54278 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.61■□□□□ 0.73
PMS2P54278 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.61■□□□□ 0.73
PMS2P54278 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.61■□□□□ 0.73
PMS2P54278 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PMS2P54278 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS2P54278 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PMS2P54278 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
PMS2P54278 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PMS2P54278 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.61■□□□□ 0.73
PMS2P54278 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.6■□□□□ 0.73
PMS2P54278 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS2P54278 AP000997.3-201ENST00000623333 2250 ntBASIC19.6■□□□□ 0.73
PMS2P54278 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PMS2P54278 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.6■□□□□ 0.73
PMS2P54278 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.6■□□□□ 0.73
PMS2P54278 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.6■□□□□ 0.73
PMS2P54278 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PMS2P54278 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.6■□□□□ 0.73
PMS2P54278 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS2P54278 AC083880.1-201ENST00000608266 535 ntBASIC19.6■□□□□ 0.73
PMS2P54278 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS2P54278 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS2P54278 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS2P54278 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PMS2P54278 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.6■□□□□ 0.73
PMS2P54278 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 FEM1AP3-201ENST00000403722 1741 ntBASIC19.59■□□□□ 0.73
PMS2P54278 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PMS2P54278 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PMS2P54278 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PMS2P54278 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PMS2P54278 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PMS2P54278 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
PMS2P54278 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.59■□□□□ 0.73
PMS2P54278 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.59■□□□□ 0.73
PMS2P54278 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.59■□□□□ 0.73
PMS2P54278 MYC-209ENST00000641252 345 ntBASIC19.59■□□□□ 0.73
PMS2P54278 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.59■□□□□ 0.73
PMS2P54278 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.59■□□□□ 0.73
PMS2P54278 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.59■□□□□ 0.73
PMS2P54278 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PMS2P54278 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PMS2P54278 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PMS2P54278 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.58■□□□□ 0.73
PMS2P54278 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.58■□□□□ 0.73
PMS2P54278 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.58■□□□□ 0.73
PMS2P54278 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PMS2P54278 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.58■□□□□ 0.73
PMS2P54278 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PMS2P54278 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PMS2P54278 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PMS2P54278 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PMS2P54278 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PMS2P54278 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.58■□□□□ 0.72
PMS2P54278 AC097658.1-201ENST00000475555 843 ntBASIC19.58■□□□□ 0.72
PMS2P54278 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.58■□□□□ 0.72
PMS2P54278 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.58■□□□□ 0.72
PMS2P54278 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.58■□□□□ 0.72
PMS2P54278 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.58■□□□□ 0.72
PMS2P54278 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PMS2P54278 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms