Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PCBP1-AS1-297ENST00000626609 809 ntTSL 57.52□□□□□ -1.214e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.41□□□□□ -1.224e-12■■□□□ 13
NCBP2P52298 SPATS2-204ENST00000548377 552 ntTSL 47.04□□□□□ -1.282e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-303ENST00000626842 741 ntTSL 57.03□□□□□ -1.284e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-308ENST00000627074 871 ntTSL 56.95□□□□□ -1.34e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-340ENST00000629188 705 ntTSL 56.81□□□□□ -1.324e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-204ENST00000413436 602 ntTSL 46.54□□□□□ -1.364e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-201ENST00000366234 884 ntTSL 56.35□□□□□ -1.394e-12■■□□□ 13
NCBP2P52298 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.27□□□□□ -1.412e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-369ENST00000631107 840 ntTSL 56.11□□□□□ -1.434e-12■■□□□ 13
NCBP2P52298 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.72□□□□□ -1.492e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-332ENST00000628667 745 ntTSL 55.69□□□□□ -1.54e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-226ENST00000434781 565 ntTSL 55.63□□□□□ -1.514e-12■■□□□ 13
NCBP2P52298 PSMA1-204ENST00000526443 569 ntTSL 25.63□□□□□ -1.512e-6■■□□□ 13
NCBP2P52298 SLC25A25-208ENST00000472769 676 ntTSL 35.6□□□□□ -1.512e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-370ENST00000631110 851 ntTSL 55.54□□□□□ -1.524e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-220ENST00000423402 553 ntTSL 45.47□□□□□ -1.534e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.89□□□□□ -1.634e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-331ENST00000628659 922 ntTSL 54.81□□□□□ -1.644e-12■■□□□ 13
NCBP2P52298 SAMD5-202ENST00000566741 393 ntTSL 34.8□□□□□ -1.642e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.68□□□□□ -1.664e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-247ENST00000596028 847 ntTSL 54.67□□□□□ -1.664e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-245ENST00000594548 692 ntTSL 54.64□□□□□ -1.674e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-222ENST00000425333 546 ntTSL 44.51□□□□□ -1.694e-12■■□□□ 13
NCBP2P52298 ADAT1-208ENST00000568001 570 ntTSL 44.1□□□□□ -1.752e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-249ENST00000596573 774 ntTSL 53.83□□□□□ -1.84e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-207ENST00000415222 502 ntTSL 43.53□□□□□ -1.844e-12■■□□□ 13
NCBP2P52298 PCBP1-AS1-338ENST00000629178 517 ntTSL 53.28□□□□□ -1.884e-12■■□□□ 13
NCBP2P52298 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.2□□□□□ -1.92e-6■■□□□ 13
NCBP2P52298 ADAT1-207ENST00000567281 547 ntTSL 43.07□□□□□ -1.922e-6■■□□□ 13
NCBP2P52298 PCBP1-AS1-254ENST00000599673 665 ntTSL 52.86□□□□□ -1.954e-12■■□□□ 13
NCBP2P52298 AL033504.1-202ENST00000432506 406 ntTSL 22.42□□□□□ -2.022e-6■■□□□ 13
NCBP2P52298 SPATS2-206ENST00000548654 546 ntTSL 31.66□□□□□ -2.142e-6■■□□□ 13
NCBP2P52298 SPATS2-215ENST00000549538 570 ntTSL 41.23□□□□□ -2.212e-6■■□□□ 13
NCBP2P52298 ZNF780B-204ENST00000594811 444 ntTSL 316.91■□□□□ 0.31e-8■■□□□ 13
NCBP2P52298 ZNF780B-203ENST00000593605 509 ntTSL 413.15□□□□□ -0.31e-8■■□□□ 13
NCBP2P52298 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.88□□□□□ -0.991e-8■■□□□ 13
NCBP2P52298 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC8.35□□□□□ -1.071e-8■■□□□ 13
NCBP2P52298 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC7.99□□□□□ -1.131e-8■■□□□ 13
NCBP2P52298 ZNF780B-205ENST00000595995 393 ntTSL 54.61□□□□□ -1.671e-8■■□□□ 13
NCBP2P52298 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.781e-8■■□□□ 13
NCBP2P52298 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.781e-8■■□□□ 13
NCBP2P52298 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.12■■□□□ 1.778e-6■■□□□ 13
NCBP2P52298 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.11■■□□□ 1.618e-6■■□□□ 13
NCBP2P52298 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.388e-6■■□□□ 13
NCBP2P52298 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.73■□□□□ 0.919e-10■■□□□ 13
NCBP2P52298 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.728e-6■■□□□ 13
NCBP2P52298 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.35■□□□□ 0.698e-6■■□□□ 13
NCBP2P52298 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.592e-8■■□□□ 13
NCBP2P52298 EIF3B-203ENST00000413917 962 ntTSL 218.57■□□□□ 0.568e-6■■□□□ 13
NCBP2P52298 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.488e-6■■□□□ 13
NCBP2P52298 STX7-204ENST00000475879 585 ntTSL 217.44■□□□□ 0.388e-6■■□□□ 13
NCBP2P52298 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.318e-6■■□□□ 13
NCBP2P52298 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.269e-10■■□□□ 13
NCBP2P52298 ARID4B-204ENST00000418304 1759 ntTSL 516.5■□□□□ 0.235e-8■■□□□ 13
NCBP2P52298 EIF3M-210ENST00000531921 1697 ntTSL 216.43■□□□□ 0.222e-8■■□□□ 13
NCBP2P52298 ARID4B-208ENST00000466653 2315 ntTSL 216.42■□□□□ 0.225e-8■■□□□ 13
NCBP2P52298 EIF3B-204ENST00000431643 1074 ntTSL 515.51■□□□□ 0.078e-6■■□□□ 13
NCBP2P52298 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.33■□□□□ 0.045e-8■■□□□ 13
NCBP2P52298 STX7-203ENST00000448348 556 ntTSL 415.14■□□□□ 0.018e-6■■□□□ 13
NCBP2P52298 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)15.12■□□□□ 0.018e-6■■□□□ 13
NCBP2P52298 EIF3M-212ENST00000532444 633 ntTSL 514.89□□□□□ -0.032e-8■■□□□ 13
NCBP2P52298 ATP5C1-210ENST00000493053 1096 ntTSL 514.89□□□□□ -0.038e-6■■□□□ 13
NCBP2P52298 ATP5C1-206ENST00000465936 292 ntTSL 314.67□□□□□ -0.068e-6■■□□□ 13
NCBP2P52298 RPS3-206ENST00000526248 771 ntTSL 514.5□□□□□ -0.098e-6■■□□□ 13
NCBP2P52298 CRLF3-203ENST00000578692 1392 ntTSL 214.45□□□□□ -0.12e-8■■□□□ 13
NCBP2P52298 EIF3M-201ENST00000323213 889 ntTSL 514.31□□□□□ -0.122e-8■■□□□ 13
NCBP2P52298 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.46□□□□□ -0.258e-6■■□□□ 13
NCBP2P52298 MSH5-206ENST00000423982 2706 ntTSL 513.36□□□□□ -0.278e-6■■□□□ 13
NCBP2P52298 ATP5C1-203ENST00000460362 414 ntTSL 313.34□□□□□ -0.278e-6■■□□□ 13
NCBP2P52298 LINC01029-203ENST00000582805 788 ntTSL 1 (best)13.16□□□□□ -0.38e-6■■□□□ 13
NCBP2P52298 KLF3-202ENST00000482150 517 ntTSL 213.07□□□□□ -0.327e-14■■□□□ 13
NCBP2P52298 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.9□□□□□ -0.342e-8■■□□□ 13
NCBP2P52298 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.388e-6■■□□□ 13
NCBP2P52298 RPS3-212ENST00000529173 1373 ntTSL 512.57□□□□□ -0.48e-6■■□□□ 13
NCBP2P52298 EIF3M-209ENST00000531186 565 ntTSL 212.43□□□□□ -0.422e-8■■□□□ 13
NCBP2P52298 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.446e-9■■□□□ 13
NCBP2P52298 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.518e-6■■□□□ 13
NCBP2P52298 RPS3-218ENST00000532872 737 ntTSL 311.65□□□□□ -0.548e-6■■□□□ 13
NCBP2P52298 RPS3-216ENST00000530721 796 ntTSL 311.65□□□□□ -0.548e-6■■□□□ 13
NCBP2P52298 RPL9-206ENST00000504470 689 ntTSL 211.48□□□□□ -0.576e-9■■□□□ 13
NCBP2P52298 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.578e-6■■□□□ 13
NCBP2P52298 ATP5C1-205ENST00000462760 573 ntTSL 211.45□□□□□ -0.588e-6■■□□□ 13
NCBP2P52298 NCOA4-203ENST00000580070 1755 ntTSL 2 BASIC11.39□□□□□ -0.598e-6■■□□□ 13
NCBP2P52298 MSH5-209ENST00000450148 1000 ntTSL 511.24□□□□□ -0.618e-6■■□□□ 13
NCBP2P52298 ATP5C1-204ENST00000460820 622 ntTSL 211.15□□□□□ -0.628e-6■■□□□ 13
NCBP2P52298 EIF3M-205ENST00000525782 2236 ntTSL 211.05□□□□□ -0.642e-8■■□□□ 13
NCBP2P52298 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)10.91□□□□□ -0.665e-8■■□□□ 13
NCBP2P52298 RPL9-211ENST00000514842 2153 ntTSL 510.84□□□□□ -0.676e-9■■□□□ 13
NCBP2P52298 RPS3-208ENST00000527273 390 ntTSL 310.49□□□□□ -0.738e-6■■□□□ 13
NCBP2P52298 MSH5-212ENST00000467319 688 ntTSL 210.22□□□□□ -0.778e-6■■□□□ 13
NCBP2P52298 RPS3-202ENST00000422465 903 ntTSL 29.78□□□□□ -0.848e-6■■□□□ 13
NCBP2P52298 NCOA4-202ENST00000579039 2211 ntTSL 2 BASIC9.69□□□□□ -0.868e-6■■□□□ 13
NCBP2P52298 MSH5-213ENST00000468136 690 ntTSL 29.64□□□□□ -0.878e-6■■□□□ 13
NCBP2P52298 AC134978.1-201ENST00000579480 788 ntTSL 3 BASIC9.63□□□□□ -0.878e-6■■□□□ 13
NCBP2P52298 MSH5-211ENST00000463144 2296 ntTSL 59.61□□□□□ -0.878e-6■■□□□ 13
NCBP2P52298 RPS3-219ENST00000534440 564 ntTSL 2 BASIC9.44□□□□□ -0.98e-6■■□□□ 13
NCBP2P52298 RPS3-210ENST00000528439 473 ntTSL 39.44□□□□□ -0.98e-6■■□□□ 13
NCBP2P52298 EIF3M-202ENST00000524711 1645 ntTSL 29.24□□□□□ -0.932e-8■■□□□ 13
NCBP2P52298 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.978e-6■■□□□ 13
Retrieved 100 of 18,329 protein–RNA pairs in 170 ms