Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.48■■□□□ 1.03
USP11P51784 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.48■■□□□ 1.03
USP11P51784 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
USP11P51784 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP11P51784 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
USP11P51784 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
USP11P51784 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
USP11P51784 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
USP11P51784 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.47■■□□□ 1.03
USP11P51784 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.47■■□□□ 1.03
USP11P51784 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.47■■□□□ 1.03
USP11P51784 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.47■■□□□ 1.03
USP11P51784 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.47■■□□□ 1.03
USP11P51784 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.47■■□□□ 1.03
USP11P51784 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.47■■□□□ 1.03
USP11P51784 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.47■■□□□ 1.03
USP11P51784 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.47■■□□□ 1.03
USP11P51784 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
USP11P51784 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
USP11P51784 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
USP11P51784 HMGA1P5-201ENST00000412453 271 ntBASIC21.46■■□□□ 1.03
USP11P51784 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.46■■□□□ 1.03
USP11P51784 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.46■■□□□ 1.03
USP11P51784 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.46■■□□□ 1.03
USP11P51784 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.46■■□□□ 1.03
USP11P51784 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
USP11P51784 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
USP11P51784 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
USP11P51784 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.45■■□□□ 1.02
USP11P51784 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 AL512353.2-201ENST00000448759 1962 ntBASIC21.45■■□□□ 1.02
USP11P51784 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.45■■□□□ 1.02
USP11P51784 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
USP11P51784 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
USP11P51784 AC005363.2-201ENST00000618631 242 ntBASIC21.45■■□□□ 1.02
USP11P51784 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 AL049812.1-201ENST00000432563 2267 ntBASIC21.45■■□□□ 1.02
USP11P51784 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
USP11P51784 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.45■■□□□ 1.02
USP11P51784 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
USP11P51784 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
USP11P51784 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.44■■□□□ 1.02
USP11P51784 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
USP11P51784 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
USP11P51784 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
USP11P51784 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
USP11P51784 SLC25A3P1-201ENST00000443844 931 ntBASIC21.44■■□□□ 1.02
USP11P51784 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.44■■□□□ 1.02
USP11P51784 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.44■■□□□ 1.02
USP11P51784 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.44■■□□□ 1.02
USP11P51784 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.44■■□□□ 1.02
USP11P51784 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
USP11P51784 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
USP11P51784 KRT8P32-201ENST00000512863 1461 ntBASIC21.44■■□□□ 1.02
USP11P51784 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms