Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL512604.3-201ENST00000569583 964 ntBASIC20.99■□□□□ 0.95
GPC3P51654 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GPC3P51654 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.99■□□□□ 0.95
GPC3P51654 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GPC3P51654 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.99■□□□□ 0.95
GPC3P51654 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
GPC3P51654 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC3P51654 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC3P51654 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.99■□□□□ 0.95
GPC3P51654 AC007952.6-201ENST00000573168 2673 ntBASIC20.99■□□□□ 0.95
GPC3P51654 AC003957.1-201ENST00000625108 2673 ntBASIC20.99■□□□□ 0.95
GPC3P51654 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
GPC3P51654 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
GPC3P51654 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.98■□□□□ 0.95
GPC3P51654 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.98■□□□□ 0.95
GPC3P51654 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.98■□□□□ 0.95
GPC3P51654 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.98■□□□□ 0.95
GPC3P51654 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 KRT8P45-201ENST00000414328 1447 ntBASIC20.98■□□□□ 0.95
GPC3P51654 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.98■□□□□ 0.95
GPC3P51654 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
GPC3P51654 COX11P1-201ENST00000489116 835 ntBASIC20.98■□□□□ 0.95
GPC3P51654 YBX1P2-201ENST00000489612 999 ntBASIC20.98■□□□□ 0.95
GPC3P51654 AC022616.7-201ENST00000525383 220 ntBASIC20.98■□□□□ 0.95
GPC3P51654 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.98■□□□□ 0.95
GPC3P51654 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.98■□□□□ 0.95
GPC3P51654 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.98■□□□□ 0.95
GPC3P51654 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GPC3P51654 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.98■□□□□ 0.95
GPC3P51654 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.98■□□□□ 0.95
GPC3P51654 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.98■□□□□ 0.95
GPC3P51654 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.97■□□□□ 0.95
GPC3P51654 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
GPC3P51654 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.97■□□□□ 0.95
GPC3P51654 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.97■□□□□ 0.95
GPC3P51654 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GPC3P51654 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.97■□□□□ 0.95
GPC3P51654 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.97■□□□□ 0.95
GPC3P51654 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.97■□□□□ 0.95
GPC3P51654 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.97■□□□□ 0.95
GPC3P51654 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.97■□□□□ 0.95
GPC3P51654 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GPC3P51654 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.97■□□□□ 0.95
GPC3P51654 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.97■□□□□ 0.95
GPC3P51654 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GPC3P51654 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GPC3P51654 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GPC3P51654 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GPC3P51654 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
GPC3P51654 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
GPC3P51654 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GPC3P51654 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GPC3P51654 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
GPC3P51654 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.96■□□□□ 0.95
GPC3P51654 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.96■□□□□ 0.95
GPC3P51654 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GPC3P51654 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.96■□□□□ 0.95
GPC3P51654 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GPC3P51654 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GPC3P51654 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GPC3P51654 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.96■□□□□ 0.95
GPC3P51654 RNF152P1-201ENST00000397754 604 ntBASIC20.96■□□□□ 0.95
GPC3P51654 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.96■□□□□ 0.95
GPC3P51654 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.96■□□□□ 0.95
GPC3P51654 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GPC3P51654 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GPC3P51654 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.96■□□□□ 0.95
GPC3P51654 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GPC3P51654 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.96■□□□□ 0.95
GPC3P51654 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.96■□□□□ 0.95
GPC3P51654 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.95■□□□□ 0.95
GPC3P51654 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
GPC3P51654 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
GPC3P51654 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GPC3P51654 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GPC3P51654 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GPC3P51654 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GPC3P51654 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.95■□□□□ 0.94
GPC3P51654 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.95■□□□□ 0.94
GPC3P51654 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GPC3P51654 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GPC3P51654 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.95■□□□□ 0.94
GPC3P51654 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.95■□□□□ 0.94
GPC3P51654 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
GPC3P51654 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.95■□□□□ 0.94
GPC3P51654 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.95■□□□□ 0.94
GPC3P51654 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
GPC3P51654 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.95■□□□□ 0.94
GPC3P51654 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms